Outline
Contents
Outline¶
The overview already specified it, but just to be sure: the workshop will be split into two distinct parts. While the first half (and few hours) will consist of going through basics in reproducible neuroimaging, the second half
will entail examples of dedicated advanced concepts within which folks will also evaluate the discussed topics. As mentioned before, these resources will contain all materials utilized in the workshop.
When and where do we meet?¶
As mentioned in the overview section, the course will take place on two afternoons: Tuesday, 22/03/2002 & Wednesday, 23/03/2022, from 1 - 6 PM CET. Given the current situation re the pandemic and the international line-up of instructors, the entire workshop will be run via Zoom and in parts Gathertown. The respective links will be provided for registered participants shortly before the workshop.
Schedule¶
In general, we will aim for 5 h per session. The content of the respective sessions will span everything from interactive lectures to hands-on tutorials and will mostly entail a mixture of the two. The different parts are roughly indicated in the schedule below like this:
💡 - input from the instructor(s)
👩🏽🏫 - instructor(s) presents content
👨🏻💻🧑🏾💻 - hands-on computational work (e.g., coding)
Our very optimistic schedule looks as follows (all times in CET):
Session 1 - 22/03/2022 - Basics of reproducible neuroimaging¶
Time slot |
Topic |
Instructor(s) |
|---|---|---|
1 - 1:15 PM |
Workshop introduction 💡👩🏽🏫 |
Dave Kennedy & Peer Herholz |
1:15 - 1:45 PM |
JB Poline |
|
1:45 - 3:15 PM |
Version control - code 💡👩🏽🏫 👨🏻💻🧑🏾💻 |
Dorota Jarecka |
3:15 - 5 PM |
Virtualization of computing environments 💡👩🏽🏫 👨🏻💻🧑🏾💻 |
Peer Herholz |
5:15 - 6 PM |
Standardization in Neuroimaging 💡👩🏽🏫 (👨🏻💻🧑🏾💻) |
Guiomar Niso |
Session 2 - 23/02/2022 - Advanced concepts in reproducible neuroimaging¶
Time slot |
Topic |
Instructor(s) |
|---|---|---|
1 - 1:15 PM |
Recap of session 1 💡👩🏽🏫 |
Dave Kennedy & Peer Herholz |
1:15 - 3:15 PM |
Version control - data 💡👩🏽🏫👨🏻💻🧑🏾💻 |
Adina Wagner |
3:30 - 4:30 PM |
Meta-Data 💡👩🏽🏫 (👨🏻💻🧑🏾💻) |
Sebastian Urchs |
4:45 - 5:30 PM |
A reproducible neuroimaging workflow - |
Peer Herholz |
5:30 - 6 PM |
everyone |
|
6 - ? PM |
everyone |